Resources
Database Credentialed Access
EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries
Sunjun Kweon, Jiyoun Kim, Heeyoung Kwak, Dongchul Cha, Hangyul Yoon, Kwang Hyun Kim, Jeewon Yang, Seunghyun Won, Edward Choi
Published: June 26, 2024. Version: 1.0.1
Database Credentialed Access
MedNLI - A Natural Language Inference Dataset For The Clinical Domain
Chaitanya Shivade
natural language inference recognizing textual entailment
Published: Oct. 1, 2019. Version: 1.0.0
Database Credentialed Access
MIMIC-IV-Ext Clinical Decision Making: A MIMIC-IV Derived Dataset for Evaluation of Large Language Models on the Task of Clinical Decision Making for Abdominal Pathologies
Paul Hager, Friederike Jungmann, Daniel Rueckert
clinical decision making abdominal pathologies large language models treatment plan emergency room diagnosis
Published: July 8, 2024. Version: 1.1
Database Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi
opioid use disorder substance use natural language processing clinical notes
Published: Feb. 8, 2023. Version: 1.0.0
Database Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi
opioid use disorder substance use natural language processing clinical notes
Published: Feb. 8, 2023. Version: 1.0.0
Database Credentialed Access
MIMIC-IV-Ext Clinical Decision Making: A MIMIC-IV Derived Dataset for Evaluation of Large Language Models on the Task of Clinical Decision Making for Abdominal Pathologies
Paul Hager, Friederike Jungmann, Daniel Rueckert
clinical decision making abdominal pathologies large language models treatment plan emergency room diagnosis
Published: July 8, 2024. Version: 1.1
Database Credentialed Access
MIMIC-IV-Note: Deidentified free-text clinical notes
Alistair Johnson, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
deidentification critical care natural language processing electronic health record clinical notes mimic
Published: Jan. 6, 2023. Version: 2.2
Database Credentialed Access
MIMIC-IV-Note: Deidentified free-text clinical notes
Alistair Johnson, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
deidentification critical care natural language processing electronic health record clinical notes mimic
Published: Jan. 6, 2023. Version: 2.2
Database Credentialed Access
CORAL: expert-Curated medical Oncology Reports to Advance Language model inference
Madhumita Sushil, Vanessa Kennedy, Divneet Mandair, Brenda Miao, Travis Zack, Atul Butte
information extraction artificial intelligence oncology natural language processing large language models electronic health records
Published: Feb. 7, 2024. Version: 1.0
Database Credentialed Access
CORAL: expert-Curated medical Oncology Reports to Advance Language model inference
Madhumita Sushil, Vanessa Kennedy, Divneet Mandair, Brenda Miao, Travis Zack, Atul Butte
information extraction artificial intelligence oncology natural language processing large language models electronic health records
Published: Feb. 7, 2024. Version: 1.0