Resources


Database Credentialed Access

BOLD, a blood-gas and oximetry linked dataset

João Matos, Tristan Struja, Jack Gallifant, Luis Filipe Nakayama, Marie Charpignon, Xiaoli Liu, Jaime dos Santos Cardoso, Leo Anthony Celi, An Kwok Wong

An open-source pulse oximetry and arterial blood gas dataset, derived from MIMIC-III, MIMIC-IV, and eICU-CRD

health equity pulse oximetry intensive care unit electronic health records

Published: Nov. 8, 2023. Version: 1.0

Database Credentialed Access

BOLD, a blood-gas and oximetry linked dataset

João Matos, Tristan Struja, Jack Gallifant, Luis Filipe Nakayama, Marie Charpignon, Xiaoli Liu, Jaime dos Santos Cardoso, Leo Anthony Celi, An Kwok Wong

An open-source pulse oximetry and arterial blood gas dataset, derived from MIMIC-III, MIMIC-IV, and eICU-CRD

health equity pulse oximetry intensive care unit electronic health records

Published: Nov. 8, 2023. Version: 1.0

Database Credentialed Access

BOLD, a blood-gas and oximetry linked dataset

João Matos, Tristan Struja, Jack Gallifant, Luis Filipe Nakayama, Marie Charpignon, Xiaoli Liu, Jaime dos Santos Cardoso, Leo Anthony Celi, An Kwok Wong

An open-source pulse oximetry and arterial blood gas dataset, derived from MIMIC-III, MIMIC-IV, and eICU-CRD

health equity pulse oximetry intensive care unit electronic health records

Published: Nov. 8, 2023. Version: 1.0

Database Open Access

The CirCor DigiScope Phonocardiogram Dataset

Jorge Oliveira, Francesco Renna, Paulo Costa, Marcelo Nogueira, Ana Cristina Oliveira, Andoni Elola, Carlos Ferreira, Alipio Jorge, Ali Bahrami Rad, Matthew Reyna, Reza Sameni, Gari Clifford, Miguel Coimbra

A large collection of multi-location heart sound signals, with 5272 records collected from 1568 subjects. Heart murmurs have been annotated by a human annotator based on their time, shape, pitch, grading, quality, location and location intensity.

signal processing murmur pitch george b moody physionet challenge 2022 murmur grading murmur location murmur timing phonocardiogram pregnant murmur shape pediatric murmur detection murmur intensity murmur quality

Published: May 10, 2022. Version: 1.0.3

Visualize waveforms

Database Credentialed Access

MIMIC-Ext-MIMIC-CXR-VQA: A Complex, Diverse, And Large-Scale Visual Question Answering Dataset for Chest X-ray Images

Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi

We introduce MIMIC-Ext-MIMIC-CXR-VQA, a complex, diverse, and large-scale dataset designed for Visual Question Answering (VQA) tasks within the medical domain, focusing primarily on chest radiographs.

question answering multimodal benchmark radiology evaluation visual question answering electronic health records deep learning machine learning chest x-ray

Published: July 19, 2024. Version: 1.0.0

Database Credentialed Access

ODD: A Benchmark Dataset for the NLP-based Opioid Related Aberrant Behavior Detection

Sunjae Kwon, Xun Wang, Weisong Liu, Emily Druhl, Minhee Sung, Joel Reisman, Wenjun Li, Robert Kerns, William Becker, Hong Yu

Opioid-related aberrant behaviors (ORABs) detection Dataset (ODD) which is a large-size, expert-annotated, and multi-label classification benchmark dataset corresponding to the task

substance use natural language processing opioid related aberrant behavior

Published: Jan. 11, 2024. Version: 1.0.0

Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in DICOM format with associated free-text reports.

computer vision chest x-rays natural language processing radiology machine learning mimic

Published: July 23, 2024. Version: 2.1.0

Database Open Access

Clinical data from the MIMIC-II database for a case study on indwelling arterial catheters

Jesse Raffa

Dataset extracted from MIMIC-II for a tutorial on effectiveness of indwelling arterial catheters in hemodynamically stable patients with respiratory failure for mortality outcomes.

Published: Oct. 28, 2016. Version: 1.0

Database Restricted Access

DREAMT: Dataset for Real-time sleep stage EstimAtion using Multisensor wearable Technology

Ke Wang, Jiamu Yang, Ayush Shetty, Jessilyn Dunn

Dataset for Real-time sleep stage EstimAtion using Multisensor wearable Technology

biomedical time series classification wearable sleep disorders

Published: Sept. 13, 2024. Version: 1.0.1

Database Restricted Access

In-hospital physical activity measured with a new Bosch accelerometer sensor system

Severin Schricker, Nico Schmid, Moritz Schanz, Martin Kimmel, Mark Dominik Alscher

Measurements of physical activity with wrist-worn Bosch sensor platform to test predictive performance for the duration of hospitalization and readmission in 58 patients with acute illnesses in internal medicine

prediction acute illness hospitalization readmission accelerometry accelerometer

Published: Dec. 3, 2020. Version: 1.0