Resources


Database Credentialed Access

ReFiSco: Report Fix and Score Dataset for Radiology Report Generation

Katherine Tian, Sina J Hartung, Andrew A Li, Jaehwan Jeong, Fardad Behzadi, Juan Calle-Toro, Subathra Adithan, Michael Pohlen, David Osayande, Pranav Rajpurkar

Preliminary human expert evaluation study on 60 MIMIC-CXR radiology reports

Published: Aug. 23, 2023. Version: 0.0

Database Restricted Access

MIMIC-Eye: Integrating MIMIC Datasets with REFLACX and Eye Gaze for Multimodal Deep Learning Applications

Chihcheng Hsieh, Chun Ouyang, Jacinto C Nascimento, Joao Pereira, Joaquim Jorge, Catarina Moreira

MIMIC-Eye: Integrating MIMIC Datasets with REFLACX and Eye Gaze for Multimodal Deep Learning Applications

Published: March 23, 2023. Version: 1.0.0

Database Restricted Access

Smartphone-Captured Chest X-Ray Photographs

Po-Chih Kuo, ChengChe Tsai, Diego M Lopez, Alexandros Karargyris, Tom Pollard, Alistair Johnson, Leo Anthony Celi

Smartphone-captured CXR images including photographs taken from MIMIC-CXR and CheXpert, photographs taken by resident doctors, and photographs taken with different devices.

smartphone photograph cxr

Published: Sept. 27, 2020. Version: 1.0.0

Database Restricted Access

Smartphone-Captured Chest X-Ray Photographs

Po-Chih Kuo, ChengChe Tsai, Diego M Lopez, Alexandros Karargyris, Tom Pollard, Alistair Johnson, Leo Anthony Celi

Smartphone-captured CXR images including photographs taken from MIMIC-CXR and CheXpert, photographs taken by resident doctors, and photographs taken with different devices.

smartphone photograph cxr

Published: Sept. 27, 2020. Version: 1.0.0

Database Credentialed Access

RadCoref: Fine-tuning coreference resolution for different styles of clinical narratives

Yuxiang Liao, Hantao Liu, Irena Spasic

RadCoref is a small subset of MIMIC-CXR with manually annotated coreference mentions and clusters. Based on the annotated data, we fine-tuned a deep neural model and used it to annotate the whole MIMIC-CXR dataset. Both data are available.

natural language processing coreference resolution radiology

Published: Jan. 30, 2024. Version: 1.0.0

Software Credentialed Access

Code for generating the HAIM multimodal dataset of MIMIC-IV clinical data and x-rays

Luis R Soenksen, Yu Ma, Cynthia Zeng, Leonard David Jean Boussioux, Kimberly Villalobos Carballo, Liangyuan Na, Holly Wiberg, Michael Li, Ignacio Fuentes, Dimitris Bertsimas

Code for generating the HAIM multimodal dataset of MIMIC-IV clinical data and x-rays

database code multimodality

Published: Aug. 23, 2022. Version: 1.0.1

Database Credentialed Access

Medical-CXR-VQA dataset: A Large-Scale LLM-Enhanced Medical Dataset for Visual Question Answering on Chest X-Ray Images

Xinyue Hu, Lin Gu, Kazuma Kobayashi, liangchen liu, Mengliang Zhang, Tatsuya Harada, Ronald Summers, Yingying Zhu

Medical-CXR-VQA provides a large-scale LLM-enhanced dataset for visual question answering in medical chest x-ray images.

Published: Jan. 21, 2025. Version: 1.0.0

Database Open Access

CheXmask Database: a large-scale dataset of anatomical segmentation masks for chest x-ray images

Nicolas Gaggion, Candelaria Mosquera, Martina Aineseder, Lucas Mansilla, Diego Milone, Enzo Ferrante

CheXmask Database is a 657,566 uniformly annotated chest radiographs with segmentation masks. Images were segmented using HybridGNet, with automatic quality control indicated by RCA scores.

automatic quality assesment chest x-ray segmentation medical image segmentation

Published: Jan. 22, 2025. Version: 1.0.0

Database Credentialed Access

Eye Gaze Data for Chest X-rays

Alexandros Karargyris, Satyananda Kashyap, Ismini Lourentzou, Joy Wu, Matthew Tong, Arjun Sharma, Shafiq Abedin, David Beymer, Vandana Mukherjee, Elizabeth Krupinski, Mehdi Moradi

This dataset was a collected using an eye tracking system while a radiologist interpreted and read 1,083 public CXR images. The dataset contains the following aligned modalities: image, transcribed report text, dictation audio and eye gaze data.

convolutional network heatmap eye tracking explainability audio chest cxr radiology deep learning machine learning multimodal chest x-ray

Published: Sept. 12, 2020. Version: 1.0.0

Database Credentialed Access

EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images

Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi

We present EHRXQA, the first multi-modal EHR QA dataset combining structured patient records with aligned chest X-ray images. EHRXQA contains a comprehensive set of QA pairs covering image-related, table-related, and image+table-related questions.

question answering benchmark evaluation visual question answering multi-modal question answering deep learning ehr question answering semantic parsing electronic health records machine learning chest x-ray

Published: July 23, 2024. Version: 1.0.0