Resources

Text-based Longitudinal Data for Predicting Nosocomial Disease Risk as used by CANTRIP.

Annotation dataset of social determinants of health from MIMC-III Clinical Care Database notes.

This dataset presents a collection of preprocessed and labeled clinical notes derived from "MIMIC-IV-Note", and aims to facilitate the development of ML models focused on summarizing brief hospital courses (BHC) from clinical notes.

MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012. The databas…

A suite of classifiers for detecting three types of stigmatizing language in electronic medical records. Trained on MIMIC-IV discharge notes.

RadCoref is a small subset of MIMIC-CXR with manually annotated coreference mentions and clusters. Based on the annotated data, we fine-tuned a deep neural model and used it to annotate the whole MIMIC-CXR dataset. Both data are available.

Medical oncology progress notes annotated with advanced, comprehensive oncology-relevant concepts and relationships.

Medical oncology progress notes annotated with advanced, comprehensive oncology-relevant concepts and relationships.

Annotations of ten types of medical decisions from discharge summaries in the MIMIC-III database.

Annotation dataset of social determinants of health from MIMC-III Clinical Care Database notes.