Resources
Database Credentialed Access
MedDec: Medical Decisions for Discharge Summaries in the MIMIC-III Database
Mohamed Elgaar, Jiali Cheng, Nidhi Vakil, Hadi Amiri, Leo Anthony Celi
natural language processing medical decisions span classification discharge summary mimic
Published: Oct. 16, 2024. Version: 1.0.0
Database Credentialed Access
MIMIC-IV-Ext-BHC: Labeled Clinical Notes Dataset for Hospital Course Summarization
Asad Aali, Dave Van Veen, Yamin Arefeen, Jason Hom, Christian Bluethgen, Eduardo Pontes Reis, Sergios Gatidis, Namuun Clifford, Joseph Daws, Arash Tehrani, Jangwon Kim, Akshay Chaudhari
natural language processing clinical notes brief hospital course text summarization machine learning
Published: Oct. 10, 2024. Version: 1.1.0
Database Credentialed Access
CORAL: expert-Curated medical Oncology Reports to Advance Language model inference
Madhumita Sushil, Vanessa Kennedy, Divneet Mandair, Brenda Miao, Travis Zack, Atul Butte
information extraction artificial intelligence oncology natural language processing large language models electronic health records
Published: Feb. 7, 2024. Version: 1.0
Database Credentialed Access
RadCoref: Fine-tuning coreference resolution for different styles of clinical narratives
Yuxiang Liao, Hantao Liu, Irena Spasic
natural language processing coreference resolution radiology
Published: Jan. 30, 2024. Version: 1.0.0
Database Credentialed Access
Annotation dataset of social determinants of health from MIMIC-III Clinical Care Database
Marco Guevara, Shan Chen, Spencer Thomas, Danielle Bitterman
natural language processing social determinants of health
Published: Jan. 24, 2024. Version: 1.0.1
Challenge Credentialed Access
BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization
Yanjun Gao, Dmitriy Dligach, Timothy Miller, Majid Afshar
bionlp clinical natural language processing electronic health record summarization
Published: Nov. 12, 2023. Version: 2.0.0
Model Credentialed Access
Characterization of Stigmatizing Language in Medical Records
Keith Harrigian, Ayah Zirikly, Brant Chee, Alya Ahmad, Anne Links, Somnath Saha, Mary Catherine Beach, Mark Dredze
clinical natural language processing domain transfer bias stigmatizing language large language models mimic
Published: Nov. 6, 2023. Version: 1.0.0
Database Credentialed Access
Nosocomial Risk Datasets from MIMIC-III
Travis Goodwin
pressure injury risk prediction acute kidney injury anemia forecasting natural language processing deep learning
Published: Sept. 15, 2022. Version: 1.0
Database Contributor Review
BRATECA (Brazilian Tertiary Care Dataset): a Clinical Information Dataset for the Portuguese Language
Henrique Dias, Ana Helena Dias Pereira dos Ulbrich
prescriptions exams tertiary care natural language processing clinical notes
Published: July 14, 2022. Version: 1.1
Database Credentialed Access
Paediatric Intensive Care database
Haomin Li, Xian Zeng, Gang Yu
intensive care pediatrics critical care natural language processing
Published: Nov. 12, 2020. Version: 1.1.0