Resources


Database Credentialed Access

RadGraph: Extracting Clinical Entities and Relations from Radiology Reports

Saahil Jain, Ashwin Agrawal, Adriel Saporta, Steven QH Truong, Du Nguyen Duong, Tan Bui, Pierre Chambon, Matthew Lungren, Andrew Ng, Curtis Langlotz, Pranav Rajpurkar

RadGraph is a dataset of entities and relations in full-text chest X-ray radiology reports, which are obtained using a novel information extraction (IE) schema to capture clinically relevant information in a radiology report.

entity and relation extraction graph multi-modal natural language processing radiology

Published: June 3, 2021. Version: 1.0.0


Database Restricted Access

Multitaper spectra recorded during GABAergic anesthetic unconsciousness

John Abel, Marcus Badgeley, Benyamin Meschede-Krasa, Gabe Schamberg, Indie Garwood, Kimaya Lecamwasam, Sourish Chakravarty, David Zhou, Matt Keating, Patrick Purdon, Emery Brown

EEG power spectra recorded during anesthesia

eeg electroencephalography unconsciousness anesthesia

Published: April 19, 2021. Version: 1.0.0


Database Credentialed Access

RaDialog Instruct Dataset

Chantal Pellegrini, Ege Özsoy, Benjamin Busam, Nassir Navab, Matthias Keicher

Image-based instruct data for Chest X-Ray understanding and analysis.

medical image understaning radiology chatbot radiology report generation radiology assistant large vision-language models

Published: July 12, 2024. Version: 1.1.0


Model Credentialed Access

Characterization of Stigmatizing Language in Medical Records

Keith Harrigian, Ayah Zirikly, Brant Chee, Alya Ahmad, Anne Links, Somnath Saha, Mary Catherine Beach, Mark Dredze

A suite of classifiers for detecting three types of stigmatizing language in electronic medical records. Trained on MIMIC-IV discharge notes.

clinical natural language processing domain transfer bias stigmatizing language large language models mimic

Published: Nov. 6, 2023. Version: 1.0.0


Database Open Access

CPAP Pressure and Flow Data from a Local Trial of 30 Adults at the University of Canterbury

Ella Guy, Jennifer Knopp, Geoff Chase

A pressure and flow dataset was collected from a trial of 30 adults at the University of Canterbury undergoing CPAP therapy for a variety of instructed breath rates at PEEP levels of 4cmH2O and 7cmH2O.

peep cpap respiratory mechanics pulmonary mechanics respiratory modelling biomedical engineering

Published: March 24, 2022. Version: 1.0.1


Database Open Access

CheXmask Database: a large-scale dataset of anatomical segmentation masks for chest x-ray images

Nicolas Gaggion, Candelaria Mosquera, Martina Aineseder, Lucas Mansilla, Diego Milone, Enzo Ferrante

CheXmask Database is a 657,566 uniformly annotated chest radiographs with segmentation masks. Images were segmented using HybridGNet, with automatic quality control indicated by RCA scores.

automatic quality assesment chest x-ray segmentation medical image segmentation

Published: Jan. 22, 2025. Version: 1.0.0


Database Credentialed Access

TherLid: A Thermometry Linked Dataset

Jeremy Tan, Inês Martins, João Matos, Tiago Filipe Sousa Gonçalves, Tetsu Ohnuma, Jaime dos Santos Cardoso, Leo Anthony Celi, Vijay Krishnamoorthy, Andrea Lane, An Kwok Wong

TherLiD is an open-source dataset of 13,251 paired temperature readings (contact and infrared) from MIMIC-IV and eICU databases. With added demographics and derived data, it supports research on racial and ethnic disparities in infrared thermometry.

thermometry intensive care unit health equity electronic health records

Published: Jan. 21, 2025. Version: 1.0.0


Database Contributor Review

COVID Data for Shared Learning (CDSL): A comprehensive, multimodal COVID-19 dataset from HM Hospitales

Álvaro Ritoré, Andreea M Oprescu, Alberto Estirado Bronchalo, Miguel Ángel Armengol de la Hoz

COVID Data for Shared Learning (CDSL) is a multimodal database comprising de-identified structured health data and radiological images from 4,479 patients with COVID-19, as a comprehensive toolkit for developing predictive models.

covid-19 multimodal database radiological images open data healthcare data machine learning and ai

Published: Oct. 25, 2024. Version: 1.0.0


Database Open Access

SHDB-AF: a Japanese Holter ECG database of atrial fibrillation

Kenta Tsutsui, Shany Biton Brimer, Joachim Behar

Holter ECG database from Japan, containing data from 100 unique patients with paroxysmal AF including expert annotations of Supraventricular arrhythmias at the beat level.

atrial fibrillation ecg holters

Published: Aug. 12, 2024. Version: 1.0.0

Visualize waveforms

Database Credentialed Access

MIMIC-Ext-MIMIC-CXR-VQA: A Complex, Diverse, And Large-Scale Visual Question Answering Dataset for Chest X-ray Images

Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi

We introduce MIMIC-Ext-MIMIC-CXR-VQA, a complex, diverse, and large-scale dataset designed for Visual Question Answering (VQA) tasks within the medical domain, focusing primarily on chest radiographs.

question answering benchmark radiology evaluation visual question answering deep learning electronic health records machine learning multimodal chest x-ray

Published: July 19, 2024. Version: 1.0.0