Transformer-DeID: Deidentification of free-text clinical notes with transformers 1.0.0

{
    "base": {
        "NAME": [
            "NAME",
            "DOCTOR",
            "PATIENT",
            "USERNAME",
            "HCPNAME",
            "RELATIVEPROXYNAME",
            "PTNAME",
            "PTNAMEINITIAL",
            "KEYVALUE",
            "INITIALS", 
            "MISC"
        ],
        "PROFESSION": [
            "PROFESSION"
        ],
        "LOCATION": [
            "LOCATION",
            "LOC",
            "DEPARTMENT",
            "HOSPITAL",
            "ORGANIZATION",
            "ORG",
            "URL",
            "STREET",
            "STATE",
            "CITY",
            "COUNTRY",
            "ZIP",
            "LOCATION-OTHER",
            "PROTECTED_ENTITY",
            "PROTECTED ENTITY",
            "NATIONALITY"
        ],
        "AGE": [
            "AGE",
            "AGE_>_89",
            "AGE > 89"
        ],
        "DATE": [
            "DATE",
            "DATEYEAR", 
            "TIME"
        ],
        "ID": [
            "BIOID",
            "DEVICE",
            "HEALTHPLAN",
            "IDNUM",
            "MEDICALRECORD",
            "MRN",
            "ID",
            "IDENTIFIER",
            "OTHER", 
            "MRN", 
            "000000", 
            "ACCESSION", 
            "GENERAL-ORDER"
        ],
        "CONTACT": [
            "EMAIL",
            "FAX",
            "PHONE",
            "CONTACT",
            "IPADDR",
            "IPADDRESS", 
            "EMAIL/URL"
        ],
        "O": [
            "O"
        ]
    },
    "hipaa": {
        "NAME": [
            "NAME",
            "PATIENT",
            "USERNAME",
            "RELATIVEPROXYNAME",
            "PTNAME",
            "PTNAMEINITIAL",
            "KEYVALUE"
        ],
        "LOCATION": [
            "LOCATION",
            "ORGANIZATION",
            "HOSPITAL",
            "STREET",
            "CITY",
            "ZIP",
            "URL",
            "PROTECTED_ENTITY",
            "PROTECTED ENTITY",
            "LOCATION-OTHER"
        ],
        "AGE": [
            "AGE",
            "AGE_>_89",
            "AGE > 89"
        ],
        "DATE": [
            "DATE",
            "DATEYEAR"
        ],
        "ID": [
            "BIOID",
            "DEVICE",
            "HEALTHPLAN",
            "IDNUM",
            "MEDICALRECORD",
            "ID",
            "IDENTIFIER",
            "OTHER"
        ],
        "CONTACT": [
            "EMAIL",
            "FAX",
            "PHONE",
            "CONTACT",
            "IPADDR",
            "IPADDRESS"
        ],
        "O": [
            "DOCTOR",
            "HCPNAME",
            "PROFESSION",
            "STATE",
            "COUNTRY",
            "NATIONALITY",
            "O"
        ]
    },
    "binary": {
        "PHI": [
            "NAME",
            "PATIENT",
            "USERNAME",
            "RELATIVEPROXYNAME",
            "PTNAME",
            "PTNAMEINITIAL",
            "DOCTOR",
            "KEYVALUE",
            "HCPNAME",
            "INITIALS",
            "LOCATION",
            "ORGANIZATION",
            "HOSPITAL",
            "PROTECTED_ENTITY",
            "PROTECTED ENTITY",
            "LOCATION-OTHER",
            "STREET",
            "CITY",
            "ZIP",
            "STATE",
            "COUNTRY",
            "NATIONALITY",
            "URL",
            "AGE",
            "AGE_>_89",
            "AGE > 89",
            "DATE",
            "DATEYEAR",
            "BIOID",
            "DEVICE",
            "HEALTHPLAN",
            "IDNUM",
            "MEDICALRECORD",
            "ID",
            "IDENTIFIER",
            "OTHER",
            "EMAIL",
            "FAX",
            "PHONE",
            "CONTACT",
            "PROFESSION",
            "IPADDR",
            "IPADDRESS"
        ],
        "O": [
            "O"
        ]
    }
}