Resources


Software Open Access

Transformer-DeID: Deidentification of free-text clinical notes with transformers

Callandra Moore, Lucas Bulgarelli, Tom Pollard, Alistair Johnson

Fine tune transformer-based neural networks to deidentify clinical text data.

deidentification neural networks transformers

Published: Nov. 2, 2023. Version: 1.0.0

Database Open Access

Image-derived cardiomegaly biomarker values for 96K chest X-rays in MIMIC-CXR/MIMIC-CXR-JPG

Benjamin Duvieusart, Felix Krones, Guy Parsons, Lionel Tarassenko, Bartlomiej W Papiez, Adam Mahdi

Automatically extracted cardiomegaly biomarkers - cardiothoracic ratio (CTR) and cardiopulmonary area ratio (CPAR) - for all posterior-anterior chest x-ray scans in MIMIC-CXR/MIMIC-CXR-JPG.

biomarkers mimic-cxr cpar ctr cardiomegaly

Published: Aug. 23, 2024. Version: 1.0.0

Software Open Access

Transformer-DeID: Deidentification of free-text clinical notes with transformers

Callandra Moore, Lucas Bulgarelli, Tom Pollard, Alistair Johnson

Fine tune transformer-based neural networks to deidentify clinical text data.

deidentification neural networks transformers

Published: Nov. 2, 2023. Version: 1.0.0

Database Credentialed Access

MedNLI - A Natural Language Inference Dataset For The Clinical Domain

Chaitanya Shivade

This is a resource for training machine learning models for language inference in the medical domain.

natural language inference recognizing textual entailment

Published: Oct. 1, 2019. Version: 1.0.0